Tuesday, April 18, 2017

Some notes on ImageJ

Add pseudo colors to images

Image -> Color -> Channel tools... -> more -> blue/red/....

1. Download Ics opener here http://valelab.ucsf.edu/~nstuurman/IJplugins/Ics_Opener.html
    Put it into folder Application / imageJ/ plugins /jars
2. Restart image j.
3. Drag your ics file onto the imageJ window
4. ImageJ asks you to select the corresponding ids file. 

You might need to increase your memory if your files are large.

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